Information for 25-ARWGWAAAGA (Motif 32)


Reverse Opposite:

p-value:1e-3
log p-value:-9.057e+00
Information Content per bp:1.646
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif4.03%
Number of Background Sequences with motif1100.1
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets93.0 +/- 59.4bp
Average Position of motif in Background103.0 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DOF5.3/MA1071.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:ARWGWAAAGA
--GAAAAAG-

PHYPADRAFT_140773/MA0987.1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:ARWGWAAAGA--
--CAAAAAGTAA

DOF2.4/MA0982.1/Jaspar

Match Rank:3
Score:0.78
Offset:3
Orientation:forward strand
Alignment:ARWGWAAAGA
---AAAAAGT

DOF1.8/MA0981.1/Jaspar

Match Rank:4
Score:0.78
Offset:2
Orientation:forward strand
Alignment:ARWGWAAAGA--
--CAAAAAGTTA

PHYPADRAFT_38837/MA1022.1/Jaspar

Match Rank:5
Score:0.78
Offset:2
Orientation:forward strand
Alignment:ARWGWAAAGA--
--CAAAAAGTGA

PHYPADRAFT_153324/MA0989.1/Jaspar

Match Rank:6
Score:0.78
Offset:2
Orientation:forward strand
Alignment:ARWGWAAAGA-
--CAAAAAGTG

DOF5.6/MA0983.1/Jaspar

Match Rank:7
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ARWGWAAAGA
--GAAAAAGT

MNB1A/MA0053.1/Jaspar

Match Rank:8
Score:0.77
Offset:5
Orientation:forward strand
Alignment:ARWGWAAAGA
-----AAAGC

Dof2/MA0020.1/Jaspar

Match Rank:9
Score:0.75
Offset:5
Orientation:forward strand
Alignment:ARWGWAAAGA-
-----AAAGCA

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:ARWGWAAAGA--
-AAATAAAGCAA