Information for 16-GCTTCCGATC (Motif 23)


Reverse Opposite:

p-value:1e-9
log p-value:-2.297e+01
Information Content per bp:1.850
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif50.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets114.2 +/- 46.8bp
Average Position of motif in Background99.9 +/- 45.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR2(MacIsaac)/Yeast

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCTTCCGATC
GCTTCCN---

GCR2/MA0305.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCTTCCGATC
GCTTCCT---

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCTTCCGATC
GCTTCC----

GCR1/MA0304.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCCGATC
GGCTTCCA---

MF0001.1_ETS_class/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTTCCGATC
-CTTCCGGT-

PB0115.1_Ehf_2/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCTTCCGATC--
TAGTATTTCCGATCTT

GCR1(MacIsaac)/Yeast

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCTTCCGATC
GGGCTTCCA---

STB4/MA0391.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCTTCCGATC
--TTCCGAG-

che-1/MA0260.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCCGATC
GGTTTC-----

MA0260.1_che-1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCCGATC
GGTTTC-----