Information for 24-TGGTCTCTAG (Motif 30)


Reverse Opposite:

p-value:1e-7
log p-value:-1.621e+01
Information Content per bp:1.933
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif71.4
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets92.3 +/- 41.4bp
Average Position of motif in Background107.2 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGGTCTCTAG--
AGGTCTCTAACC

ABF2/MA0266.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGGTCTCTAG-
----CTCTAGA

TCP5/MA1067.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCTCTAG
GTGGTCCC---

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCTCTAG
NNANTGGTGGTCTTNNN

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGGTCTCTAG--
NNATTGGACTTTNGNN

ARALYDRAFT_496250/MA1096.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCTCTAG
GTGGTCCC---

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCTCTAG
CAGTGTGGTCGC---

RTG3/Literature(Harbison)/Yeast

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGTCTCTAG
-GGTCAC---

MGA1/MA0336.1/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCTCTAG----
NTTNNAGTGTTCTATANNNNN

TCP4/MA1035.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCTCTAG
GTGGTCCC---