Information for 13-AAAGTTAGTTAG (Motif 13)


Reverse Opposite:

p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.871
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.5 +/- 51.1bp
Average Position of motif in Background116.8 +/- 49.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB.PH3(2)(MYB)/Petunia hybrida/AthaMap

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTAGTTAG
AAAAGTTAGTTAC

YAP1/YAP1_H2O2Lo/3-YAP1(Harbison)/Yeast

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AAAGTTAGTTAG-
----TTAGTCAGC

Vsx2/MA0180.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAAGTTAGTTAG
---TTTAATTAG

CG33980/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAAGTTAGTTAG
--NTTTAATTAG

YAP1(MacIsaac)/Yeast

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AAAGTTAGTTAG--
---ATTAGTCAGCA

tll/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAAGTTAGTTAG
AAAGTCA-----

zfh-2/MA0928.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGTTAGTTAG-
--AATTAATTAGA

PH0155.1_Prrx2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAGTTAGTTAG-----
AAAGCTAATTAGCGAAA

Al/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AAAGTTAGTTAG--
----TTAATTAGCN

Lim1/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAGTTAGTTAG
--NNTTAATTAG