Homer de novo Motif Results (/srv/scratch/jisraeli/projects/jzeitlinger_collab/homer_analysis/cluster_1_homer/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1254
Total background sequences = 8114
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A A C G T C A T G C G T A A G T C G C T A G T C A G A C T C T G A C A T G 1e-18-4.182e+0111.56%5.19%62.9bp (72.1bp)Sox17/MA0078.1/Jaspar(0.778)
More Information | Similar Motifs Found		motif file (matrix)
2 A C T G A C T G A G T C A C G T A T G C C G T A G T C A C G T A C G T A A G T C A C G T A C T G 1e-12-2.977e+010.72%0.02%87.6bp (11.2bp)Ng_0261(RRM)/Naegleria_gruberi-RNCMPT00261-PBM/HughesRNA(0.617)
More Information | Similar Motifs Found		motif file (matrix)
3 A C T G G C A T A C T G A T G C G T A C T G A C A T C G A G T C A G T C G C A T 1e-12-2.974e+017.10%2.96%104.2bp (98.8bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.699)
More Information | Similar Motifs Found		motif file (matrix)
4 C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G 1e-12-2.937e+016.54%2.63%95.9bp (95.6bp)YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA(0.737)
More Information | Similar Motifs Found		motif file (matrix)
5 G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T 1e-12-2.768e+016.30%2.57%86.6bp (91.9bp)CDC5(MYB)/Arabidopsis thaliana/AthaMap(0.683)
More Information | Similar Motifs Found		motif file (matrix)
6 * C A G T C T A G A G T C G C A T G C T A C A T G A T C G A G T C G C A T T G C A C G A T A C G T 1e-11-2.748e+018.77%4.22%90.2bp (93.3bp)POU3F4/MA0789.1/Jaspar(0.633)
More Information | Similar Motifs Found		motif file (matrix)
7 * C G A T A G C T A G C T A C G T G T A C C T G A A G T C G C T A 1e-11-2.640e+0117.38%10.87%96.6bp (96.4bp)CG11617/dmmpmm(Noyes_hd)/fly(0.871)
More Information | Similar Motifs Found		motif file (matrix)
8 * A G T C A G T C A G T C A G T C C G T A A T C G C G T A A C G T C T G A C G T A 1e-11-2.570e+010.64%0.00%83.6bp (0.0bp)MIG1(MacIsaac)/Yeast(0.796)
More Information | Similar Motifs Found		motif file (matrix)
9 * G C A T T G C A T G A C G C T A C G A T C G T A C T A G G C A T C G T A G C T A G C A T C A G T 1e-10-2.483e+012.55%0.60%88.6bp (77.9bp)Ubx/dmmpmm(Down)/fly(0.703)
More Information | Similar Motifs Found		motif file (matrix)
10 * A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C 1e-10-2.460e+013.59%1.11%99.6bp (98.6bp)HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer(0.656)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C G T C G A T T C A G C T G A T A C G C T G A G A T C C G T A C T A G C G A T 1e-10-2.394e+019.57%5.06%89.8bp (99.3bp)DIG1/DIG1_YPD/32-STE12(Harbison)/Yeast(0.711)
More Information | Similar Motifs Found		motif file (matrix)
12 * G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G 1e-10-2.384e+010.96%0.07%96.1bp (68.9bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.747)
More Information | Similar Motifs Found		motif file (matrix)
13 * A T C G A C T G A C G T A C T G A T C G A C G T A C T G A C T G A G T C C T G A A G T C C G T A 1e-9-2.186e+012.87%0.83%86.6bp (101.4bp)ZBTB7C/MA0695.1/Jaspar(0.661)
More Information | Similar Motifs Found		motif file (matrix)
14 * A C T G C T A G A C G T A G T C C G T A C T A G A G T C A G T C A G T C A C G T 1e-9-2.179e+010.96%0.08%79.1bp (61.6bp)WRKY2/MA1078.1/Jaspar(0.691)
More Information | Similar Motifs Found		motif file (matrix)
15 * A G T C C G T A A G T C C G T A A C G T A G T C A C T G A G T C A G T C C G T A A C T G A C T G 1e-9-2.175e+010.56%0.01%113.9bp (0.0bp)brk/dmmpmm(Bergman)/fly(0.634)
More Information | Similar Motifs Found		motif file (matrix)
16 * C T G A T A C G C T G A C T A G C T G A A T C G C G A T T A C G C T G A C T A G 1e-9-2.096e+0121.53%15.09%114.7bp (111.1bp)SeqBias: GA-repeat(0.838)
More Information | Similar Motifs Found		motif file (matrix)
17 * T C A G A T C G A T G C C A T G T A C G T A G C C G A T C A T G C G A T T C A G 1e-8-1.926e+018.53%4.70%94.3bp (94.7bp)AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer(0.798)
More Information | Similar Motifs Found		motif file (matrix)
18 * T A C G G A C T G A C T A G C T C G T A A T C G A G C T T C G A T C G A G C T A 1e-8-1.879e+013.19%1.12%97.1bp (109.8bp)ARR1/Literature(Harbison)/Yeast(0.797)
More Information | Similar Motifs Found		motif file (matrix)
19 * C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T 1e-7-1.841e+0129.82%22.93%93.2bp (95.6bp)TEC1(MacIsaac)/Yeast(0.722)
More Information | Similar Motifs Found		motif file (matrix)
20 * C A G T G T C A T C G A T C G A C A G T A G T C G C A T A C T G A C G T T G A C 1e-7-1.817e+016.06%3.00%105.8bp (98.9bp)CNOT4(RRM)/Homo_sapiens-RNCMPT00156-PBM/HughesRNA(0.778)
More Information | Similar Motifs Found		motif file (matrix)
21 * A C G T C G T A C G T A G C A T A T G C A G T C A G T C C G T A A T C G A G T C C G T A A G T C 1e-7-1.797e+014.07%1.69%103.7bp (111.3bp)ACE2/MA0267.1/Jaspar(0.709)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C T G C G T A A C T G A C G T C G T A A G T C A G T C A C G T A C T G A G T C 1e-7-1.793e+010.48%0.02%47.0bp (125.7bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.720)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C G T A G T C G T C A C G T A C G T A A C T G A G T C A C G T C G T A C G T A 1e-7-1.767e+011.67%0.37%88.9bp (98.2bp)pan/dmmpmm(Papatsenko)/fly(0.721)
More Information | Similar Motifs Found		motif file (matrix)
24 * C G T A A C T G C G T A A C G T A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C T G 1e-7-1.766e+010.88%0.09%96.8bp (104.7bp)PB0099.1_Zfp691_1/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)
25 * C G T A A T C G A C G T A T C G C G T A C G T A A C T G A C G T A T C G A G T C 1e-7-1.727e+011.04%0.14%75.8bp (68.0bp)tin/dmmpmm(Papatsenko)/fly(0.762)
More Information | Similar Motifs Found		motif file (matrix)
26 * A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C 1e-6-1.611e+014.23%1.90%89.2bp (104.1bp)NFIC::TLX1/MA0119.1/Jaspar(0.667)
More Information | Similar Motifs Found		motif file (matrix)
27 * C G T A A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T C G T A C G T A 1e-6-1.533e+010.80%0.09%83.4bp (87.5bp)AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer(0.613)
More Information | Similar Motifs Found		motif file (matrix)
28 * C G T A A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C T G A G T C A G T C A G T C 1e-6-1.520e+011.20%0.23%78.7bp (101.8bp)vnd/dmmpmm(Pollard)/fly(0.605)
More Information | Similar Motifs Found		motif file (matrix)
29 * A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C 1e-6-1.390e+010.48%0.04%85.9bp (30.2bp)MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA(0.794)
More Information | Similar Motifs Found		motif file (matrix)
30 * A T C G A C G T C G A T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C T G C A T G 1e-6-1.389e+012.63%1.01%120.2bp (108.2bp)PB0123.1_Foxl1_2/Jaspar(0.824)
More Information | Similar Motifs Found		motif file (matrix)
31 * A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A 1e-5-1.364e+018.45%5.22%105.8bp (100.0bp)Tb_0218(RRM)/Trypanosoma_brucei-RNCMPT00218-PBM/HughesRNA(0.828)
More Information | Similar Motifs Found		motif file (matrix)
32 * A C G T A G T C A G T C A G T C G T A C A C G T A G T C T A C G A G T C A G T C A G C T A T C G 1e-5-1.349e+010.96%0.17%108.2bp (98.4bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.737)
More Information | Similar Motifs Found		motif file (matrix)
33 * T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A 1e-5-1.345e+0113.24%9.17%94.2bp (93.0bp)bin/dmmpmm(Bergman)/fly(0.784)
More Information | Similar Motifs Found		motif file (matrix)
34 * A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T 1e-5-1.153e+011.44%0.43%95.4bp (96.0bp)STP1/MA0394.1/Jaspar(0.819)
More Information | Similar Motifs Found		motif file (matrix)
35 * A C T G A C T G C G T A A C T G A G T C C G T A A G T C C G T A 1e-4-1.143e+013.35%1.61%99.5bp (103.3bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.811)
More Information | Similar Motifs Found		motif file (matrix)
36 * C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G 1e-4-1.085e+018.45%5.58%95.2bp (102.0bp)UME1/UME1_YPD/[](Harbison)/Yeast(0.760)
More Information | Similar Motifs Found		motif file (matrix)
37 * A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T 1e-4-9.555e+0026.95%22.35%91.8bp (95.0bp)SWI5/Literature(Harbison)/Yeast(0.769)
More Information | Similar Motifs Found		motif file (matrix)
38 * C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C T G 1e-3-8.481e+0098.96%97.53%95.2bp (98.2bp)TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA(0.890)
More Information | Similar Motifs Found		motif file (matrix)
39 * A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G 1e-3-8.124e+000.32%0.03%90.0bp (40.7bp)QKI(KH)/Homo_sapiens-RNCMPT00047-PBM/HughesRNA(0.775)
More Information | Similar Motifs Found		motif file (matrix)