Information for 24-CGACTAACCG (Motif 39)

A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T A C G T C G T A A C T G A C G T A G T C A C T G
p-value:1e-3
log p-value:-8.124e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets247.8 +/- 90.0bp
Average Position of motif in Background76.4 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

QKI(KH)/Homo_sapiens-RNCMPT00047-PBM/HughesRNA

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CGACTAACCG
--ACTAACA-
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G
A C G T A C G T C G T A A G T C A C G T C G T A C G T A A G T C T G C A A C G T

HOW(KH)/Drosophila_melanogaster-RNCMPT00118-PBM/HughesRNA

Match Rank:2
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CGACTAACCG
--ACTAACA-
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G
A C G T A C G T C G T A A G T C A C G T C G T A C G T A A G T C T G C A A C G T

SF1(KH)/Drosophila_melanogaster-RNCMPT00065-PBM/HughesRNA

Match Rank:3
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CGACTAACCG
--ACTAACN-
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G
A C G T A C G T C G T A G T A C A C G T C G T A C G T A A G T C T C G A A C G T

PFF0320c(RRM)/Plasmodium_falciparum-RNCMPT00235-PBM/HughesRNA

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CGACTAACCG
--ACTAAAC-
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G
A C G T A C G T C T G A A G T C A C G T C G T A T C G A C G T A G T A C A C G T

ovo/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGACTAACCG-
--AGTAACNGT
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G A C G T
A C G T A C G T G C T A A T C G C G A T C G T A C G T A A G T C G C T A A C T G G C A T

ovo/MA0126.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGACTAACCG-
--AGTAACAGT
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G A C G T
A C G T A C G T G C T A A T C G C G A T C G T A C G T A A G T C G C T A A C T G G C A T

prd/MA0239.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGACTAACCG-
--AGTAACAGT
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G A C G T
A C G T A C G T G C T A A T C G C G A T C G T A C G T A A G T C G C T A A C T G G C A T

MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGACTAACCG--
----TAACNGTY
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A C G T A A G T C A T C G A C T G G C A T G A C T

ovo/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGACTAACCG
----TAACGG
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A G C T C G T A C T G A A G T C C T A G A C T G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGACTAACCG---
---NHAACBGYYV
 A G T C A C T G C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A