Information for 7-CACTGACCTGAG (Motif 12)

G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G
Reverse Opposite:
A G T C G A C T T G A C G C T A C T A G A T C G C G A T T A G C G C T A C A T G C G A T C A T G
p-value:1e-10
log p-value:-2.384e+01
Information Content per bp:1.516
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets167.4 +/- 96.1bp
Average Position of motif in Background213.7 +/- 68.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CACTGACCTGAG
---TGACCTYA-
 G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CACTGACCTGAG
--CTGACCTTTG
 G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CACTGACCTGAG
---TGACCT---
 G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CACTGACCTGAG
AGGTCANTGACCTN--
 A C G T A C G T A C G T A C G T G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CACTGACCTGAG
--GTGACCTT--
 G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

EcR/usp/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CACTGACCTGAG
GAGGTCATTGACCTC--
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G
C T A G C T G A C A T G A C T G A C G T A G T C T C G A C G A T A C G T C T A G C G T A G T A C A G T C A G C T A G T C A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACTGACCTGAG----
--NTGCCCANNGGTNA
 G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CACTGACCTGAG--
--ATGCCCTGAGGC
 G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G A C G T A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACTGACCTGAG
CNNTTGACCTTTG
 A C G T G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACTGACCTGAG-
---TGACCTTGAT
 G T A C G C T A G T A C C G A T A T C G G C T A T A G C G A T C C G A T A C T G C T G A T C A G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T