Information for 20-TTTCCACTCC (Motif 29)

A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.390e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets95.8 +/- 85.9bp
Average Position of motif in Background210.7 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TTTCCACTCC
-TTCCACT--
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
A C G T A C G T C G A T A G T C A G T C C G T A G A T C A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TTTCCACTCC
ATTTTCCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TTTCCACTCC
ATTTTCCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TTTCCACTCC
ATTTTCCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTTCCACTCC
ATTTTCCATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTTCCACTCC
TTTTCCA----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTCCACTCC---
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTTCCACTCC
-TTCCTCT--
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTTCCACTCC-
---CNTCTCCT
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A G T C G A T C G C A T A G T C C G A T A G T C A G T C A C G T

At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTCCACTCC
WTTYTACT--
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C
G C A T A C G T A G C T A G C T A G C T C G T A A G T C A C G T A C G T A C G T