Information for 6-GCCTCCAACAGC (Motif 10)

A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
Reverse Opposite:
T C A G A G T C C G A T A C T G C G A T A C G T A C T G A C T G C G T A C T A G C T A G G T A C
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.824
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif90.0
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets157.4 +/- 99.6bp
Average Position of motif in Background176.2 +/- 98.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCCTCCAACAGC
--WTCCATCA--
 A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
A C G T A C G T G C A T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T

MET28/MA0332.1/Jaspar

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCCTCCAACAGC
-----CCACAG-
 A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T

MET28(MacIsaac)/Yeast

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCCTCCAACAGC
-----CCACAG-
 A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCTCCAACAGC
-ACTCCATC---
 A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
A C G T C G T A G A T C A C G T A G T C A G T C C G T A C G A T G T A C A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00109-PBM/HughesRNA

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCAACAGC
NTCCTCC------
 A C G T A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
A G C T A G C T A G T C T A G C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

GCR2(MacIsaac)/Yeast

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCTCCAACAGC
GCTTCCN-----
 A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
T A C G A G T C C G A T A C G T A G T C A T G C G C A T A C G T A C G T A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00108-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCAACAGC
NTCCTCC------
 A C G T A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
A G T C A G C T A G T C T A G C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

GCR2/MA0305.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCTCCAACAGC
GCTTCCT-----
 A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
T A C G A G T C C G A T A C G T A G T C A T G C G C A T A C G T A C G T A C G T A C G T A C G T

ARF3/MA1009.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCCTCCAACAGC
--TTCCGACA--
 A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
A C G T A C G T G A C T A G C T T A G C T G A C C T A G T C G A T A G C T G C A A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCAACAGC
NTCCTCC------
 A C G T A C T G A G T C A G T C A C G T A G T C A G T C G T C A C G T A A G T C C G T A A C T G A G T C
A C G T A G C T A G T C T G A C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T