Information for 5-RGTATTTA (Motif 33)

T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A
Reverse Opposite:
A C G T C G T A C T G A G C T A A C G T C G T A A G T C A G C T
p-value:1e-5
log p-value:-1.345e+01
Information Content per bp:1.782
Number of Target Sequences with motif166.0
Percentage of Target Sequences with motif13.24%
Number of Background Sequences with motif744.2
Percentage of Background Sequences with motif9.17%
Average Position of motif in Targets156.0 +/- 94.2bp
Average Position of motif in Background159.9 +/- 93.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bin/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:RGTATTTA-
--TATTTAC
 T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A G C T

exex/MA0224.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:RGTATTTA
-GTAATTA
 T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A
A C G T A T C G A C G T C G T A C G T A A C G T G A C T C T G A

PH0072.1_Hoxc8/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----RGTATTTA----
TTGGGGTAATTAACGT
 A C G T A C G T A C G T A C G T T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

Exex/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-RGTATTTA-
NNGTAATTAN
 A C G T T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T
T A C G C A G T A T C G A C G T C G T A C G T A A C G T G A C T C T G A T C G A

PH0053.1_Hoxa6/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----RGTATTTA----
NTNAGGTAATTACCTT
 A C G T A C G T A C G T A C G T T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T A C G T A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

pal-1/MA0924.1/Jaspar

Match Rank:6
Score:0.75
Offset:1
Orientation:forward strand
Alignment:RGTATTTA-
-GTAATAAA
 T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T
A C G T C T A G A G C T G T C A C G T A A C G T C G T A C G T A G T C A

Unknown4/Drosophila-Promoters/Homer

Match Rank:7
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---RGTATTTA-
TKYGGTATTTTT
 A C G T A C G T A C G T T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T
C G A T C A G T A G C T C T A G C T A G A C G T C G T A A G C T C G A T C G A T G C A T G A C T

PH0055.1_Hoxa7_2/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--RGTATTTA------
GTAGTAATTAATGGAA
 A C G T A C G T T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

PH0020.1_Dlx1/Jaspar

Match Rank:9
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----RGTATTTA--
CTGAGGTAATTAAT
 A C G T A C G T A C G T A C G T T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T A C G T
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---RGTATTTA------
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T T C G A A C T G C G A T C G T A C G A T A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A