Information for 3-GTTATTAA (Motif 31)

A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A
Reverse Opposite:
C G A T C G A T G T C A C G T A A C G T C G T A G T C A A G T C
p-value:1e-5
log p-value:-1.364e+01
Information Content per bp:1.890
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif423.6
Percentage of Background Sequences with motif5.22%
Average Position of motif in Targets161.0 +/- 105.8bp
Average Position of motif in Background168.1 +/- 100.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tb_0218(RRM)/Trypanosoma_brucei-RNCMPT00218-PBM/HughesRNA

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GTTATTAA
AGTTATTA-
 A C G T A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A
C G T A C A T G A C G T A C G T C G T A A C G T G C A T C T G A A C G T

MEX-5(Znf)/Caenorhabditis_elegans-RNCMPT00039-PBM/HughesRNA

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GTTATTAA
NTTATTAT
 A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A
G C T A C G A T A C G T C G T A A C G T A C G T C G T A C G A T

abd-A/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GTTATTAA--
GTAATTAAAA
 A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T
A C T G A G C T G T C A C G T A A C G T C G A T C G T A C T G A C T G A C T G A

QKR58E-1(KH)/Drosophila_melanogaster-RNCMPT00142-PBM/HughesRNA

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GTTATTAA
-TTATTAT
 A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A
A C G T A C G T C G A T C G T A A C G T A C G T C G T A A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GTTATTAA
GTAATTAA
 A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A

PH0073.1_Hoxc9/Jaspar

Match Rank:6
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GTTATTAA----
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GTTATTAA-
NGTRATTAAK
 A C G T A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A A C G T
G T C A C T A G A G C T T C G A T G C A C A G T A G C T C G T A C T G A A C G T

Scr/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GTTATTAA--
GTCATTAANG
 A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T
A C T G A G C T T G A C G T C A A C G T A C G T G T C A C T G A A G T C C A T G

CG7056/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTTATTAA--
NTAATTAAAN
 A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A A C G T A C G T
A C T G A G C T G C T A T C G A A C G T G C A T T G C A C T G A C G T A C G A T

Antp/MA0166.1/Jaspar

Match Rank:10
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTATTAA
-TCATTAA
 A C T G A C G T A C G T G T C A A C G T A C G T C G T A C G T A
A C G T A G C T G T A C C G T A A C G T A C G T C G T A C G T A