Information for 3-AGCCCTGAGCWT (Motif 5)

G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T
Reverse Opposite:
C T G A C G T A T C A G A G T C G A C T A T G C C G T A A C T G C A T G C T A G A G T C A C G T
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.741
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif6.30%
Number of Background Sequences with motif208.7
Percentage of Background Sequences with motif2.57%
Average Position of motif in Targets147.3 +/- 86.6bp
Average Position of motif in Background150.3 +/- 91.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGCCCTGAGCWT
CGCGCTGAGCN-
 G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T
A T G C T A C G A G T C A T C G G T A C C G A T C T A G C G T A T A C G A T G C A G T C A C G T

CDC5/MA0579.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGCCCTGAGCWT
CGCGCTGAGCN-
 G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T
A T G C T A C G A G T C A T C G G T A C C G A T C T A G C G T A T A C G A T G C A G T C A C G T

TBF1/MA0403.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGCCCTGAGCWT
AACCCTAA----
 G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T
C G T A T C G A G T A C A G T C A G T C A G C T T C G A T C G A A C G T A C G T A C G T A C G T

REI1/MA0364.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCCCTGAGCWT
-CCCCTGA----
 G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T
A C G T A G T C G T A C A G T C A G T C A C G T A C T G C T G A A C G T A C G T A C G T A C G T

USV1/MA0413.1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGCCCTGAGCWT---
AAATTCCCCCTGAATTTGTG
 A C G T A C G T A C G T A C G T A C G T G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T A C G T A C G T A C G T
C G T A C G T A C G T A A G C T C A G T T G A C A T G C A G T C G T A C G A T C A G C T A C T G C T G A G T C A G A C T G A C T C G A T A C T G C A G T T A C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCCTGAGCWT
ATGCCCTGAGGC-
 A C G T G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

GSM1/MA0308.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCCCTGAGCWT------
NNNACTCCGGAGTTTNNTNAN
 A C G T A C G T A C G T G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G T C A G C A T T G C A A G T C A G C T G A T C T A G C A T C G C T A G T C G A T C A G G C A T G C A T C G A T G A C T G A C T G C A T C T G A T G C A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCCCTGAGCWT-
NTGCCCANNGGTNA
 A C G T G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCCCTGAGCWT
TAAACCCT------
 A C G T A C G T G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T
C G A T C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGCCCTGAGCWT
---GCTGTG---
 G T C A C T A G A G T C G A T C A G T C C G A T A T C G C T G A C T A G A G T C G C A T G A C T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T