Information for 11-AGAATGCTACTT (Motif 19)

C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
Reverse Opposite:
T G C A C T G A C A T G C A G T C T G A T C A G A T G C G T C A C A G T A C G T A T G C G C A T
p-value:1e-7
log p-value:-1.841e+01
Information Content per bp:1.619
Number of Target Sequences with motif374.0
Percentage of Target Sequences with motif29.82%
Number of Background Sequences with motif1860.9
Percentage of Background Sequences with motif22.93%
Average Position of motif in Targets170.0 +/- 93.2bp
Average Position of motif in Background163.6 +/- 95.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEC1(MacIsaac)/Yeast

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGAATGCTACTT
AGAATGTG----
 C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
T C G A C T A G C T G A C T G A C A G T C T A G G A C T T C A G A C G T A C G T A C G T A C G T

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGAATGCTACTT
AGGAATG------
 A C G T C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
C T G A T C A G C A T G C T G A G T C A C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

TEC1/MA0406.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGAATGCTACTT
GGGAATGT-----
 A C G T C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
T C A G C T A G A T C G C G T A C G T A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGAATGCTACTT-
ATTATGCTAATTT
 C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAATGCTACTT--
--TATGCWAATBAV
 C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T A C G T A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Tb_0220(RRM)/Trypanosoma_brucei-RNCMPT00220-PBM/HughesRNA

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGAATGCTACTT
NAGAAAG------
 A C G T C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
C G T A C T G A A C T G C T G A C G T A C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAATGCTACTT
AGAAGGC-----
 C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
C G T A A C T G C G T A C G T A C T A G T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Lm_0212(RRM)/Leishmania_major-RNCMPT00212-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAATGCTACTT
AAAATGN-----
 C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
C G T A C G T A C G T A C G T A A C G T A C T G G C A T A C G T A C G T A C G T A C G T A C G T

TARDBP(RRM)/Homo_sapiens-RNCMPT00076-PBM/HughesRNA

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAATGCTACTT
NGAATGAN----
 C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
C G A T A C T G C T G A C G T A A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGAATGCTACTT
ACAAAG------
 C G T A T A C G G T C A G T C A C A G T A T C G A G T C G A C T G T C A G T A C G A C T A C G T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T