Information for 8-CAGCCGGT (Motif 37)

A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T
Reverse Opposite:
C T G A A T G C A G T C A T C G T A C G A T G C C G A T T C A G
p-value:1e-4
log p-value:-9.555e+00
Information Content per bp:1.594
Number of Target Sequences with motif338.0
Percentage of Target Sequences with motif26.95%
Number of Background Sequences with motif1813.3
Percentage of Background Sequences with motif22.35%
Average Position of motif in Targets159.1 +/- 91.8bp
Average Position of motif in Background165.0 +/- 95.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI5/Literature(Harbison)/Yeast

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCGGT
CCAGCA---
 A C G T A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T
A G C T A G T C C G T A A C T G A G T C G T A C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CAGCCGGT-
NCAGCTGCTG
 A C G T A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CAGCCGGT
CAGCC---
 A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCGGT-
HCAGCTGDTN
 A C G T A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T A C G T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCGGT
DCTCAGCAGG-
 A C G T A C G T A C G T A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

RDS1/MA0361.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAGCCGGT
CGGCCGA-
 A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T
A G T C A T C G A C T G A T G C A T G C A T C G T A C G A C G T

YLL054C/MA0429.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCGGT
TCGGCCG--
 A C G T A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T
C G A T A G T C A T C G A C T G A G T C A G T C A C T G A C G T A C G T

RDS1(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAGCCGGT
CGGCCG--
 A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T
A G T C A C T G A C T G A G T C A G T C A C T G A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CAGCCGGT
NAACAGCTGG-
 A C G T A C G T A C G T A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGCCGGT----
CCGCCGCCATHD
 A G T C G C T A T A C G A T G C T A G C T C A G T A C G G A C T A C G T A C G T A C G T A C G T
A T G C G T A C C T A G A G T C G T A C C T A G G A T C G T A C C G T A G C A T G C A T C G A T