Information for 22-AAAGAAAGGAAG (Motif 36)

C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
Reverse Opposite:
G A T C G A C T A C G T A G T C G T A C G C A T A C G T A G C T A T G C A G C T A G C T A G C T
p-value:1e-4
log p-value:-1.085e+01
Information Content per bp:1.718
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif8.45%
Number of Background Sequences with motif452.6
Percentage of Background Sequences with motif5.58%
Average Position of motif in Targets229.5 +/- 95.2bp
Average Position of motif in Background144.4 +/- 102.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

UME1/UME1_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAAGAAAGGAAG
AAGGAAANGTA-
 C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
C T G A C G T A A C T G A C T G C T G A C G T A C G T A T G C A A C T G C G A T C G T A A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAAAGGAAG
AAAACAAAGG---
 A C G T C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Tb_0220(RRM)/Trypanosoma_brucei-RNCMPT00220-PBM/HughesRNA

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAAGAAAGGAAG
-NAGAAAG----
 C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
A C G T C G T A C T G A A C T G C T G A C G T A C T G A C T A G A C G T A C G T A C G T A C G T

ZC3H14(Znf)/Homo_sapiens-RNCMPT00086-PBM/HughesRNA

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAAGAAAGGAAG
AAACAAA-----
 C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
C G T A G T C A G T C A G T A C G T C A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Lm_0255(RRM)/Leishmania_major-RNCMPT00255-PBM/HughesRNA

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAGAAAGGAAG
AAAAAAA-----
 C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
C G T A C G T A G T C A T G C A C T G A T G C A T C G A A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAGAAAGGAAG
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAGAAAGGAAG-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAGAAAGGAAG
WNWARWDGAAATGAT-
 A C G T A C G T A C G T A C G T C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
G C A T C G T A G C A T C G T A T C G A C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C T G G T C A G C A T A C G T

AZF1/MA0277.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AAAGAAAGGAAG
---AAAAAGAAA
 C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
A C G T A C G T A C G T C G T A C G T A C G T A G T C A C T G A A C T G G T C A C G T A C G T A

HuR(RRM)/Homo_sapiens-RNCMPT00117-PBM/HughesRNA

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAGAAAGGAAG
AAACAAA-----
 C T G A T C G A C T G A T A C G C T G A G T C A C G T A C A T G C T A G T G C A C T G A C T A G
G T C A C T G A G T C A A G T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T