Information for 6-CTGCGGCT (Motif 34)

A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A C T G A G T C T C G A A C T G
p-value:1e-5
log p-value:-1.153e+01
Information Content per bp:1.960
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif34.7
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets138.7 +/- 95.4bp
Average Position of motif in Background150.0 +/- 96.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STP1/MA0394.1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CTGCGGCT-
-TGCGGCGC
 A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A G C T C T A G A G T C A C T G C T A G A G T C C A T G A T G C

STP1(MacIsaac)/Yeast

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CTGCGGCT-
-TGCGGCGC
 A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A G C T C T A G A G T C A C T G C T A G A G T C C A T G A T G C

UME6(MacIsaac)/Yeast

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGGCT-
TCGGCGGCTA
 A C G T A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
A G C T A T G C T C A G A T C G A T G C A T C G A T C G A G T C C G A T C T G A

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGGCT-
TCGGCGGCTA
 A C G T A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
A G C T A T G C T A C G A T C G T A G C C T A G T A C G A G T C C G A T C T G A

At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTGCGGCT-
WTKGCGGCKR
 A C G T A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
C G T A G C A T C A T G C T A G A G T C A C T G A T C G G T A C A C T G T C A G

At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CTGCGGCT-
NWDTTGCGGCTR
 A C G T A C G T A C G T A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
C G T A C G A T C G A T G C A T C G A T T C A G A G T C A C T G C T A G A G T C A C G T C T G A

ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTGCGGCT-
WTKRCGGCGB
 A C G T A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
C G T A G C A T C A G T C T A G A G T C A C T G A C T G G T A C A C T G A T C G

ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CTGCGGCT-
-GGCGGCTR
 A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T C T A G

PHD1/PHD1_BUT90/8-SUT1(Harbison)/Yeast

Match Rank:9
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGGCT
CCTGCGGC-
 A C G T A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T
A T G C T A G C A G C T A C T G T A G C T C A G A T C G T A G C A C G T

AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTGCGGCT-
-GGCGGCTG
 A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C G T
A C G T A C T G C T A G A G T C A C T G A C T G A G T C A C G T C T A G