Information for 3-AACAGCTCTG (Motif 4)

C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G
Reverse Opposite:
A G T C C G T A A C T G C G T A A C T G A G T C A C G T A C T G C G A T A C G T
p-value:1e-12
log p-value:-2.937e+01
Information Content per bp:1.847
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif6.54%
Number of Background Sequences with motif213.6
Percentage of Background Sequences with motif2.63%
Average Position of motif in Targets158.3 +/- 95.9bp
Average Position of motif in Background163.4 +/- 95.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AACAGCTCTG
AACAACN---
 C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G
C T G A C T G A A T G C C G T A C G T A A G T C C G T A A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AACAGCTCTG
BAACAGCTGT-
 A C G T C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T

bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AACAGCTCTG--
NNTGACAGCTGDNHN
 A C G T A C G T A C G T C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G A C G T A C G T
C G A T C G A T C G A T C A T G G T C A A G T C C G T A C T A G A G T C C G A T T C A G C G A T G A T C G T C A G C T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AACAGCTCTG
AACAGCTG--
 C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AACAGCTCTG
AACAGCTGTT
 C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G
T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

MYF6/MA0667.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AACAGCTCTG
AACAGCTGTT
 C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G
T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

Tcf21/MA0832.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AACAGCTCTG--
GCAACAGCTGTTGT
 A C G T A C G T C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G A C G T A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AACAGCTCTG
NAACAGCTGG-
 A C G T C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

E-box/Drosophila-Promoters/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AACAGCTCTG
NDAACAGCTGTT
 A C G T A C G T C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G
G A T C C T G A T C G A G C T A G T A C G C T A C T A G G A T C C G A T A C T G C G A T A G C T

PL0003.1_hlh-2::cnd-1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AACAGCTCTG---
AGGAACAGCTGTCTAA
 A C G T A C G T A C G T C G T A C G T A G T A C C G T A C T A G A G T C A C G T A G T C G C A T C T A G A C G T A C G T A C G T
G T C A A T C G C A T G G T C A T G C A G T A C C G T A A C T G T G A C C G A T C A T G A C G T A G T C G A C T G C T A C G T A