Information for 16-CACGAAGCCAAC (Motif 26)

A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.530
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif154.0
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets181.2 +/- 89.2bp
Average Position of motif in Background150.5 +/- 104.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACGAAGCCAAC
TGGCACCATGCCAA-
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

che-1/MA0260.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CACGAAGCCAAC
---GAAACC---
 A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C
A C G T A C G T A C G T A C T G C G T A C G T A C T G A A G T C A T G C A C G T A C G T A C G T

MA0260.1_che-1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CACGAAGCCAAC
---GAAACC---
 A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C
A C G T A C G T A C G T A C T G C G T A C G T A C T G A A G T C A T G C A C G T A C G T A C G T

ceh-10::ttx-3/MA0263.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACGAAGCCAAC
TTAACGAAGCCAAT
 A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C
G A C T C G A T C T G A C G T A A G T C A C T G C T G A C T G A C T A G G T A C A G T C C G T A G T C A A G C T

MA0263.1_ttx-3::ceh-10/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACGAAGCCAAC
TTAACGAAGCCAAT
 A C G T A C G T A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C
G A C T C G A T C T G A C G T A A G T C A C T G C T G A C T G A C T A G G T A C A G T C C G T A G T C A A G C T

PUT3(MacIsaac)/Yeast

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACGAAGCCAAC----
CGGGAAGCCACCCCCG
 A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A G T C A C T G C T A G T A C G C T G A C G T A C T A G A G T C A T G C G T C A G T A C G A T C G A T C G A T C A T G C A T C G

WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CACGAAGCCAAC-
---NAAGTCAACG
 A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G T A T C G A A C T G A C G T A G T C C G T A C G T A G T A C A C T G

WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACGAAGCCAAC-
-WWAAAGTCAACK
 A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C A C G T
A C G T G C T A C G T A G C T A C G T A C T G A A C T G A C G T G T A C C G T A C T G A G T A C A C T G

XBP1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACGAAGCCAAC
CTCGAAG-----
 A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C
A G T C A C G T A G T C A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T

AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACGAAGCCAAC-
---NAAGTCAACG
 A G T C C G T A A G T C A C T G C G T A C G T A A C T G A G T C A G T C C G T A C G T A A G T C A C G T
A C G T A C G T A C G T G A C T C G T A C T G A A C T G A C G T G T A C C G T A C T G A G T A C A T C G