Homer de novo Motif Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/indivRep_allPeaks-pr1.IDR0.05.ZF3vsWT.HomerResults//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 49081
Total background sequences = 78796
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-5431	-1.251e+04	51.64%	11.32%	85.0bp (131.9bp)	CTCF/MA0531.1/Jaspar(0.843) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-906	-2.086e+03	13.62%	3.70%	125.0bp (137.9bp)	brk/dmmpmm(Bergman)/fly(0.786) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-379	-8.737e+02	20.58%	11.87%	105.0bp (166.7bp)	NFIX/MA0671.1/Jaspar(0.776) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-234	-5.396e+02	5.75%	2.20%	119.1bp (156.2bp)	HIC2/MA0738.1/Jaspar(0.669) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-167	-3.863e+02	3.60%	1.25%	99.2bp (152.9bp)	ABF2/MA0266.1/Jaspar(0.743) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-104	-2.402e+02	1.48%	0.36%	91.3bp (155.2bp)	DRE1C/MA0985.1/Jaspar(0.835) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-49	-1.135e+02	1.47%	0.63%	130.5bp (144.4bp)	opa/dmmpmm(Noyes)/fly(0.669) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-22	-5.119e+01	0.54%	0.21%	123.7bp (153.3bp)	DAL82/MA0291.1/Jaspar(0.717) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-18	-4.241e+01	0.58%	0.26%	119.8bp (151.0bp)	Tag/dmmpmm(Papatsenko)/fly(0.710) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-17	-4.049e+01	14.01%	12.33%	138.2bp (151.2bp)	POL013.1_MED-1/Jaspar(0.747) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-14	-3.388e+01	2.75%	2.06%	130.7bp (173.9bp)	GTS1(MacIsaac)/Yeast(0.716) More Information \| Similar Motifs Found	motif file (matrix)
12 *		1e-11	-2.732e+01	0.19%	0.05%	135.6bp (125.1bp)	Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.662) More Information \| Similar Motifs Found	motif file (matrix)
13 *		1e-10	-2.385e+01	0.28%	0.11%	135.3bp (132.3bp)	XBP1/Literature(Harbison)/Yeast(0.685) More Information \| Similar Motifs Found	motif file (matrix)
14 *		1e-7	-1.802e+01	10.59%	9.63%	128.3bp (164.7bp)	WRKY62/MA1091.1/Jaspar(0.714) More Information \| Similar Motifs Found	motif file (matrix)
15 *		1e-7	-1.667e+01	0.34%	0.18%	129.7bp (119.1bp)	Unknown4/Arabidopsis-Promoters/Homer(0.674) More Information \| Similar Motifs Found	motif file (matrix)
16 *		1e-6	-1.611e+01	0.10%	0.03%	134.7bp (162.3bp)	Trl/dmmpmm(Pollard)/fly(0.670) More Information \| Similar Motifs Found	motif file (matrix)
17 *		1e-6	-1.492e+01	1.05%	0.77%	139.5bp (167.8bp)	EWSR1-FLI1/MA0149.1/Jaspar(0.735) More Information \| Similar Motifs Found	motif file (matrix)
18 *		1e-5	-1.348e+01	1.98%	1.62%	131.6bp (175.3bp)	TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.780) More Information \| Similar Motifs Found	motif file (matrix)
19 *		1e-5	-1.263e+01	0.31%	0.18%	140.3bp (175.9bp)	SeqBias: GA-repeat(0.644) More Information \| Similar Motifs Found	motif file (matrix)
20 *		1e-5	-1.214e+01	0.14%	0.06%	135.2bp (169.3bp)	MAC1/Literature(Harbison)/Yeast(0.613) More Information \| Similar Motifs Found	motif file (matrix)
21 *		1e-4	-1.029e+01	0.05%	0.01%	94.0bp (119.7bp)	SMZ/MA0553.1/Jaspar(0.581) More Information \| Similar Motifs Found	motif file (matrix)
22 *		1e-1	-2.795e+00	28.10%	27.70%	132.2bp (169.6bp)	Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer(0.720) More Information \| Similar Motifs Found	motif file (matrix)