Information for 18-CTGCGAGAGC (Motif 13)


Reverse Opposite:

p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.945
Number of Target Sequences with motif135.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif90.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets229.4 +/- 135.3bp
Average Position of motif in Background223.7 +/- 132.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

XBP1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTGCGAGAGC
CTTCGAG---

Trl/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTGCGAGAGC--
--GAGAGAGCAA

Trl/MA0205.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTGCGAGAGC--
--GAGAGAGCAA

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGAGAGC-----
NGCTGCGATATCGNCGC

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGCGAGAGC-
GRTGMTRGAGCC

ZBTB33/MA0527.1/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CTGCGAGAGC
NAGNTCTCGCGAGAN-

Adf1/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGAGAGC
NACAGAAGCAGC

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGCGAGAGC-
---RGAGAGAG

Med/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGAGAGC
ACTGCGCCTG-

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCGAGAGC---
TTGACCGAGAATTCC