Information for 6-CACTAGAT (Motif 5)


Reverse Opposite:

p-value:1e-167
log p-value:-3.863e+02
Information Content per bp:1.936
Number of Target Sequences with motif1765.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif983.6
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets180.8 +/- 99.2bp
Average Position of motif in Background215.6 +/- 152.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ABF2/MA0266.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CACTAGAT
CTCTAGA-

tin/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CACTAGAT
CACTTGA-

GATA9/MA1018.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CACTAGAT----
-TCTAGATCTGT

vnd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CACTAGAT
CACTTGAN

tin/MA0247.2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CACTAGAT-
CCACTTGANA

tin/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CACTAGAT
CACTTAA-

ARR10/MA0121.1/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CACTAGAT----
----AGATCCGC

ARR1/MA0945.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CACTAGAT-----
---NAGATTCGNT

br-Z3/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACTAGAT-
-ACTAGTTT

ARR18/MA0948.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACTAGAT-----
ATCAAGATACGAT