Information for 17-GGGGAGCAGCAG (Motif 12)


Reverse Opposite:

p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.954
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif43.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets214.2 +/- 135.6bp
Average Position of motif in Background214.4 +/- 125.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCAGCAG
-GGGAGGACNG-

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCAGCAG
-CGGAGC-----

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGCAGCAG
TGGGGA-------

SeqBias: GCW-triplet

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGGGAGCAGCAG--
--GCAGCAGCAGCA

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGGAGCAGCAG
-TGGAACAGMA-

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGCAGCAG
AGGGTAACAGC--

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCAGCAG-
-GGGAATTGTAGT

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGGGAGCAGCAG
----ANCAGCTG

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGGGAGCAGCAG--
--NNAGCAGCTGCT

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGCAGCAG--
ADGGYAGYAGCATCT