Information for 17-TTKGTMCYSA (Motif 11)


Reverse Opposite:

p-value:1e-14
log p-value:-3.388e+01
Information Content per bp:1.664
Number of Target Sequences with motif1350.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif1625.0
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets205.9 +/- 130.7bp
Average Position of motif in Background233.5 +/- 173.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GTS1(MacIsaac)/Yeast

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTKGTMCYSA
TTGGTA----

HAP2/MA0313.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTKGTMCYSA
TTGGT-----

br-Z1/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTKGTMCYSA
TTAGTATT--

br-Z1/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTKGTMCYSA
ATTTGTATT--

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTKGTMCYSA
YCTTTGTTCC--

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTKGTMCYSA
CCTTTGTTTT--

ARALYDRAFT_897773/MA1054.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTKGTMCYSA
GTGGTCCCCA

HAP2/Literature(Harbison)/Yeast

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTKGTMCYSA
ATTGG------

HAP3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTKGTMCYSA
ATTGG------

HAP5/Literature(Harbison)/Yeast

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTKGTMCYSA
ATTGG------