Information for 20-TCGTCGTCGT (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.667e+01
Information Content per bp:1.584
Number of Target Sequences with motif166.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif145.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets228.9 +/- 129.7bp
Average Position of motif in Background229.3 +/- 119.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCGTCGTCGT-
-CKTCKTCTTY

PB0131.1_Gmeb1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCGTCGTCGT---
TGGGCGACGTCGTTAA

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TCGTCGTCGT-
GNNATTTGTCGTAANN

GLI2/MA0734.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCGTCGTCGT
CAGTGTGGTCGC

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCGTCGTCGT--
NTTATTCGTCATNC

ZBTB7A/MA0750.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCGTCGTCGT-
TCGGTGGTCGCN

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCGTCGTCGT
-TGTCGCCGC

ARF8/MA0944.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCGTCGTCGT-
--TTTGTCGGC

Adf1/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCGTCGTCGT
-CGCGGTCG-

Aef1/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCGTCGTCGT
-TGTTGTTG-