Information for 9-AGATGTCGGT (Motif 6)


Reverse Opposite:

p-value:1e-104
log p-value:-2.402e+02
Information Content per bp:1.943
Number of Target Sequences with motif726.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif281.5
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets175.3 +/- 91.3bp
Average Position of motif in Background202.3 +/- 155.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DRE1C/MA0985.1/Jaspar

Match Rank:1
Score:0.84
Offset:2
Orientation:forward strand
Alignment:AGATGTCGGT
--ATGTCGGC

ARF1/MA0942.1/Jaspar

Match Rank:2
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:AGATGTCGGT
--NTGTCGGT

PHYPADRAFT_64121/MA1010.1/Jaspar

Match Rank:3
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AGATGTCGGT-----
--TTGTCGGTATAAA

ERF043/MA0996.1/Jaspar

Match Rank:4
Score:0.79
Offset:3
Orientation:forward strand
Alignment:AGATGTCGGT-
---TGTCGGTG

DREB1A/MA0971.1/Jaspar

Match Rank:5
Score:0.78
Offset:2
Orientation:forward strand
Alignment:AGATGTCGGT--
--ATGTCGGCAA

DREB2C/MA0986.1/Jaspar

Match Rank:6
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:AGATGTCGGT-
---TGTCGGTG

DREB1E/MA0978.1/Jaspar

Match Rank:7
Score:0.77
Offset:2
Orientation:forward strand
Alignment:AGATGTCGGT
--ATGTCGGC

PHYPADRAFT_173530/MA1007.1/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:forward strand
Alignment:AGATGTCGGT-
---TGTCGGTG

PHYPADRAFT_28324/MA1023.1/Jaspar

Match Rank:9
Score:0.75
Offset:3
Orientation:forward strand
Alignment:AGATGTCGGT-
---TGTCGGTG

PHYPADRAFT_182268/MA1008.1/Jaspar

Match Rank:10
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AGATGTCGGT--
--TTGTCGGTGA