Information for 13-TGGACAWC (Motif 14)


Reverse Opposite:

p-value:1e-7
log p-value:-1.802e+01
Information Content per bp:1.405
Number of Target Sequences with motif5197.0
Percentage of Target Sequences with motif10.59%
Number of Background Sequences with motif7585.1
Percentage of Background Sequences with motif9.63%
Average Position of motif in Targets203.7 +/- 128.3bp
Average Position of motif in Background225.1 +/- 164.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

WRKY62/MA1091.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGGACAWC
TGGTCAAC

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGGACAWC
GTGGAT---

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGACAWC
TGGAAAA-

exd/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGACAWC
TTTTGACAAA

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGACAWC
NATGGAAAAN

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGACAWC
AATGGAAAAT

exd/MA0222.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGGACAWC
TTTTGACA--

WRKY60/MA1090.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGGACAWC--
CCGGTCAACGT

WRKY25/MA1081.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGGACAWC
CGGTCAAC

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGACAWC
NTTTGACAGC