Information for 21-AAGGAWTSCT (Motif 18)


Reverse Opposite:

p-value:1e-5
log p-value:-1.348e+01
Information Content per bp:1.605
Number of Target Sequences with motif970.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif1275.8
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets204.5 +/- 131.6bp
Average Position of motif in Background239.5 +/- 175.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AAGGAWTSCT
NCTGGAATGC-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAGGAWTSCT
CCWGGAATGY-

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AAGGAWTSCT
TTAGGAC----

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AAGGAWTSCT
-AGGAATG--

TEAD3/MA0808.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAGGAWTSCT
-TGGAATGT-

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AAGGAWTSCT
CCWGGAATGY-

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAGGAWTSCT
NTGGAATGTN

TEC1/MA0406.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AAGGAWTSCT
-GGGAATGT-

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGGAWTSCT
NTGGAATGTG

Eip74EF/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAGGAWTSCT
-AGGAAGTAT