Information for 5-ACAGCGCCMC (Motif 2)


Reverse Opposite:

p-value:1e-906
log p-value:-2.086e+03
Information Content per bp:1.682
Number of Target Sequences with motif6684.0
Percentage of Target Sequences with motif13.62%
Number of Background Sequences with motif2913.4
Percentage of Background Sequences with motif3.70%
Average Position of motif in Targets203.8 +/- 125.0bp
Average Position of motif in Background222.1 +/- 137.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

brk/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:ACAGCGCCMC
--AGCGCCA-

brk/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:ACAGCGCCMC
--GGCGCCAG

brk/MA0213.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:ACAGCGCCMC
--GGCGCCAG

brk/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:ACAGCGCCMC
--GGCGCCAG

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ACAGCGCCMC
--GGCGCCAG

brk/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ACAGCGCCMC
--GGCGCCA-

RPN4/MA0373.1/Jaspar

Match Rank:7
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:ACAGCGCCMC-
----CGCCACC

brk/dmmpmm(Down)/fly

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ACAGCGCCMC
--AGCGCCGG

SNT2(MacIsaac)/Yeast

Match Rank:9
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ACAGCGCCMC--
ATGATAGCGCCGCNC

ERF109/MA1053.1/Jaspar

Match Rank:10
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACAGCGCCMC-
---GCGCCGCC