Information for 15-CTGCGCACAA (Motif 8)


Reverse Opposite:

p-value:1e-22
log p-value:-5.119e+01
Information Content per bp:1.916
Number of Target Sequences with motif264.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif162.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets204.4 +/- 123.7bp
Average Position of motif in Background230.9 +/- 153.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DAL82/MA0291.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTGCGCACAA-
--GCGCACATT

TEA1/MA0405.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTGCGCACAA
--GCGGACAT

HMRA1/MA0327.1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTGCGCACAA-
----ACACAAT

MATA1(MacIsaac)/Yeast

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTGCGCACAA-
----ACACAAT

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTGCGCACAA---
ATTTGCATACAATGG

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGCGCACAA----
CGAAGCACACAAAATA

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTGCGCACAA---
---VRRACAAWGG

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTGCGCACAA---
---RNAACAATGG

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTGCGCACAA---
NNGTATGTGCACATNNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGCACAA---
NNTTTGCACACGGCCC