Information for 10-GCGCTCCT (Motif 10)


Reverse Opposite:

p-value:1e-17
log p-value:-4.049e+01
Information Content per bp:1.787
Number of Target Sequences with motif6875.0
Percentage of Target Sequences with motif14.01%
Number of Background Sequences with motif9712.2
Percentage of Background Sequences with motif12.33%
Average Position of motif in Targets216.1 +/- 138.2bp
Average Position of motif in Background227.9 +/- 151.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GCGCTCCT
--GCTCCG

ttk/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCGCTCCT---
--GGTCCTGCC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCGCTCCT
CNGTCCTCCC

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GCGCTCCT---
CGAACAGTGCTCACTAT

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCGCTCCT--
---GTCCTAA

ttk/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCGCTCCT-
--GGTCCTG

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCGCTCCT----
NTCGCGCGCCTTNNN

ttk/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCGCTCCT--
--GGTCCTGC

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGCTCCT
GCGCGCTA

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCGCTCCT----
ANCGCGCGCCCTTNN