Information for 19-TAGAGAGCACTA (Motif 16)


Reverse Opposite:

p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.863
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif23.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets238.2 +/- 134.7bp
Average Position of motif in Background261.3 +/- 162.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAGAGAGCACTA
GAGAGAGCAA--

Trl/MA0205.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGCACTA
GAGAGAGCAA--

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAGAGAGCACTA----
NNNNTGAGCACTGTNNG

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TAGAGAGCACTA
GGTTAGAGACCT---

Trl/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGAGAGCACTA
AGAGAGAGAGNAA

MGA1/MA0336.1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAGAGAGCACTA----
AGGACTATAGAACACTCTAAA

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGAGAGCACTA
-RGAGAGAG---

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAGAGAGCACTA
BTBRAGTGSN---

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGCACTA
TTGAGTGSTT--

EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGCACTA---
TRGAGCGCRYTTGCA