Information for 23-TCCTTGGA (Motif 22)


Reverse Opposite:

p-value:1e-1
log p-value:-2.795e+00
Information Content per bp:1.498
Number of Target Sequences with motif13792.0
Percentage of Target Sequences with motif28.10%
Number of Background Sequences with motif21822.5
Percentage of Background Sequences with motif27.70%
Average Position of motif in Targets201.0 +/- 132.2bp
Average Position of motif in Background226.8 +/- 169.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTGGA
TGACCTTGAN

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCCTTGGA---
TTCTTGGAAAN

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTGGA
TGACCTTGAV

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTGGA------
NNTTCCTTTGATCTNNA

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCCTTGGA--
CTTCTGGGAAA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCCTTGGA------
ATTTCCTTTGATCTATA

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTGGA------
NNTTCCTTTGATCTANA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCCTTGGA---
-CCTTTGATGT

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCCTTGGA------
AATCCCTTTGATCTATC

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCCTTGGA---
-CCTTTGAWGT