Homer de novo Motif Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/indivRep_allPeaks-pr1.IDR0.05.ZF7vsWT.HomerResults//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 54748
Total background sequences = 73667
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-10066	-2.318e+04	73.27%	15.25%	77.9bp (174.2bp)	BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.936) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-578	-1.332e+03	7.58%	1.76%	106.2bp (216.5bp)	SEP3/MA0563.1/Jaspar(0.642) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-464	-1.070e+03	6.55%	1.63%	77.9bp (217.8bp)	PB0091.1_Zbtb3_1/Jaspar(0.776) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-253	-5.843e+02	64.76%	55.34%	121.5bp (203.1bp)	SOK2/MA0385.1/Jaspar(0.762) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-180	-4.161e+02	7.12%	3.54%	97.5bp (214.8bp)	Stat6/MA0520.1/Jaspar(0.658) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-172	-3.971e+02	7.36%	3.79%	86.4bp (212.4bp)	GFY(?)/Promoter/Homer(0.631) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-138	-3.189e+02	3.31%	1.26%	95.8bp (214.4bp)	SOK2(MacIsaac)/Yeast(0.774) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-126	-2.916e+02	13.72%	9.42%	108.5bp (207.7bp)	PHD1/MA0355.1/Jaspar(0.683) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-112	-2.599e+02	28.23%	22.68%	113.8bp (201.4bp)	SKN7/MA0381.1/Jaspar(0.805) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-98	-2.264e+02	7.06%	4.33%	103.6bp (216.8bp)	bab1/dmmpmm(Pollard)/fly(0.673) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-92	-2.123e+02	3.84%	1.94%	105.5bp (214.6bp)	PB0099.1_Zfp691_1/Jaspar(0.733) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-85	-1.960e+02	2.67%	1.18%	92.7bp (213.0bp)	PB0026.1_Gm397_1/Jaspar(0.675) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-78	-1.816e+02	2.47%	1.09%	107.7bp (233.1bp)	cad/dmmpmm(Bergman)/fly(0.705) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-68	-1.580e+02	2.08%	0.90%	110.7bp (211.1bp)	ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast(0.609) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-67	-1.559e+02	3.44%	1.88%	94.8bp (211.9bp)	PB0208.1_Zscan4_2/Jaspar(0.662) More Information \| Similar Motifs Found	motif file (matrix)
16		1e-59	-1.360e+02	7.74%	5.47%	116.0bp (209.7bp)	pros/dmmpmm(Bergman)/fly(0.653) More Information \| Similar Motifs Found	motif file (matrix)
17		1e-40	-9.351e+01	2.18%	1.21%	109.9bp (232.0bp)	Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.685) More Information \| Similar Motifs Found	motif file (matrix)
18		1e-25	-5.935e+01	2.29%	1.49%	106.1bp (224.5bp)	ct/MA0218.1/Jaspar(0.731) More Information \| Similar Motifs Found	motif file (matrix)
19 *		1e-5	-1.189e+01	0.29%	0.17%	153.2bp (180.0bp)	Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer(0.610) More Information \| Similar Motifs Found	motif file (matrix)
20 *		1e-1	-2.962e+00	0.30%	0.25%	125.9bp (177.1bp)	GCR2/MA0305.1/Jaspar(0.650) More Information \| Similar Motifs Found	motif file (matrix)