Information for 7-GTGGCCAG (Motif 9)


Reverse Opposite:

p-value:1e-112
log p-value:-2.599e+02
Information Content per bp:1.833
Number of Target Sequences with motif15452.0
Percentage of Target Sequences with motif28.23%
Number of Background Sequences with motif16707.3
Percentage of Background Sequences with motif22.68%
Average Position of motif in Targets193.8 +/- 113.8bp
Average Position of motif in Background231.8 +/- 201.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SKN7/MA0381.1/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:GTGGCCAG
--GGCCAT

MET32/MA0334.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCAG
TGTGGCG--

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTGGCCAG
--TGCCAA

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTGGCCAG---
-TGCCCAGNHW

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTGGCCAG-
CGTGCCAAG

MET31/MA0333.1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGGCCAG
AGTGTGGCG--

RTG3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTGGCCAG
GTGACC--

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCCAG
GGTGGCAAA

Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCCAG
CAGTGTGACCRK

RPN4(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTGGCCAG-
CGGTGGCAAAA