Information for 21-AGGTTCAATT (Motif 18)


Reverse Opposite:

p-value:1e-25
log p-value:-5.935e+01
Information Content per bp:1.844
Number of Target Sequences with motif1256.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif1095.4
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets180.3 +/- 106.1bp
Average Position of motif in Background238.3 +/- 224.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ct/MA0218.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGGTTCAATT
--GTTCAA--

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGTTCAATT
NNGTTCAAGN

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGTTCAATT--
AGTTTCAGTTTC

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGGTTCAATT--
CTCCAGGGGTCAATTGA

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGGTTCAATT---
TCAGTTTCATTTTCC

TEIL(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGGTTCAATT
AGGTACAT--

YHP1/MA0426.1/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AGGTTCAATT-
-----CAATTA

YHP1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AGGTTCAATT-
-----CAATTA

YHP1(MacIsaac)/Yeast

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AGGTTCAATT-
-----CAATTA

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGTTCAATT--
ASTTTCACTTCC