Information for 25-CGTTCCTTCC (Motif 20)


Reverse Opposite:

p-value:1e-1
log p-value:-2.962e+00
Information Content per bp:1.868
Number of Target Sequences with motif163.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif183.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets198.8 +/- 125.9bp
Average Position of motif in Background265.7 +/- 177.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR2/MA0305.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CGTTCCTTCC-
----GCTTCCT

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:2
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------CGTTCCTTCC
CCTTCCTTCCTTCCTTCC

kni/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGTTCCTTCC-
--TTTGTTCCC

Eip74EF/MA0026.1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CGTTCCTTCC--
-----CTTCCGG

GCR2(MacIsaac)/Yeast

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGTTCCTTCC-
----GCTTCCN

PB0012.1_Elf3_1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGTTCCTTCC-----
--TTACTTCCTNGTN

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CGTTCCTTCC---
-----CTTCCGGT

ARR11/MA0946.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGTTCCTTCC
CGTATCTT--

UME1/UME1_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTTCCTTCC---
--TACNTTTCCTT

PB0011.1_Ehf_1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGTTCCTTCC-------
--TNACTTCCGGNTNNN