Information for 18-TGGAGAGATGGC (Motif 16)


Reverse Opposite:

p-value:1e-59
log p-value:-1.360e+02
Information Content per bp:1.692
Number of Target Sequences with motif4235.0
Percentage of Target Sequences with motif7.74%
Number of Background Sequences with motif4029.6
Percentage of Background Sequences with motif5.47%
Average Position of motif in Targets179.5 +/- 116.0bp
Average Position of motif in Background207.8 +/- 209.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pros/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGGAGAGATGGC
---AGNCATG--

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGAGAGATGGC
--AACAGATGGC

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGAGAGATGGC
-RGAGAGAG---

SeqBias: GA-repeat

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGAGAGATGGC
--GAGAGAGAGA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGAGATGGC
AATGGAAAAT----

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGGAGAGATGGC---
---CAAGATGGCGGC

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGAGAGATGGC
TGGAAAA-----

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGAGATGGC
AATGGAAAAT----

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGAGATGGC
NNTGGAAANN----

PL0015.1_hlh-2::hlh-14/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGAGATGGC--
TNNNGACAGGTGTTNN