Information for 22-AGAGGAGAGGAG (Motif 19)


Reverse Opposite:

p-value:1e-5
log p-value:-1.189e+01
Information Content per bp:1.933
Number of Target Sequences with motif159.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif127.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets217.3 +/- 153.2bp
Average Position of motif in Background183.8 +/- 180.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGAGGAGAGGAG
---RGAGAGAG-

TOD6?/SacCer-Promoters/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGAGGAGAGGAG--
----GCGATGAGMT

Trl/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAGGAGAGGAG
--GAGAGAGCAA

Trl/MA0205.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGAGGAGAGGAG
--GAGAGAGCAA

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGAGGAGAGGAG--
----GGGAGGACNG

DOT6/MA0351.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGAGAGGAG--------
ANGANGCGATGAGGTGCNNNN

eor-1/MA0543.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGAGGAGAGGAG-
AGAGAGACGCAGAGA

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGAGGAGAGGAG
TGCGCATAGGGGAGGAG

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGAGGAGAGGAG
-----AGAGGAA

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGAGGAGAGGAG-------
--NTNNNAGGAGTCTCNTN