Information for 8-TTTTGCCTGCAT (Motif 7)


Reverse Opposite:

p-value:1e-138
log p-value:-3.189e+02
Information Content per bp:1.695
Number of Target Sequences with motif1814.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif927.0
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets171.4 +/- 95.8bp
Average Position of motif in Background212.2 +/- 214.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
--TTGCCTGC--

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
---TNCCTGCA-

SOK2/MA0385.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TTTTGCCTGCAT--
---NNCCTGCAGGT

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
-TTTGCATGGA-

MOT3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
---TACCTN---

MOT3(MacIsaac)/Yeast

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
---TACCTN---

MOT3/MA0340.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
---TACCTN---

gcm2/MA0917.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
----ACCCGCAT

NAC058/MA0938.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
--TTGCGTGN--

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTTTGCCTGCAT
--TTGCGTGCVA