Information for 19-TGGGAAYCAAAC (Motif 17)


Reverse Opposite:

p-value:1e-40
log p-value:-9.351e+01
Information Content per bp:1.732
Number of Target Sequences with motif1192.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif893.5
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets183.1 +/- 109.9bp
Average Position of motif in Background239.9 +/- 232.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAYCAAAC
CSTGGGAAAD----

Su(H)/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGGAAYCAAAC
ATGAGAA------

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGGGAAYCAAAC
CGTGGGAAC-----

Su(H)/MA0085.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGGGAAYCAAAC-
CTGTGGGAAACGAGAT

kni/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGGAAYCAAAC
-GGGAACAAA--

Su(H)/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGAAYCAAAC
GAANGTGAGAACTA---

Ik-1

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGGGAAYCAAAC
ACTTGGGAATACC--

ara/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGGGAAYCAAAC
----AATCAA--

Rel/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGGAAYCAAAC
GGGGAATCCCN-

onecut/MA0235.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGGGAAYCAAAC
---AAATCAA--