Information for 5-TTCCAGAGGACC (Motif 5)


Reverse Opposite:

p-value:1e-180
log p-value:-4.161e+02
Information Content per bp:1.695
Number of Target Sequences with motif3897.0
Percentage of Target Sequences with motif7.12%
Number of Background Sequences with motif2609.5
Percentage of Background Sequences with motif3.54%
Average Position of motif in Targets173.3 +/- 97.5bp
Average Position of motif in Background231.6 +/- 214.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTCCAGAGGACC
CATTTCCTGAGAAAT

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTCCAGAGGACC
TTCCKNAGAA--

RME1(MacIsaac)/Yeast

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCCAGAGGACC
-TCCAAAGGAA-

RME1/MA0370.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCCAGAGGACC
-TCCAAAGGAA-

ttk/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTCCAGAGGACC
-----CAGGACC

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAGAGGACC
ATGCCAGACN---

REI1/MA0364.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCCAGAGGACC
--TCAGGGG---

Tal1

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCCAGAGGACC
---CAGATG---

ttk/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCCAGAGGACC
---GCCAGGACC

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCCAGAGGACC
ANTTCTNNAGAA--