Information for 6-ACTGSAGTTMCA (Motif 6)


Reverse Opposite:

p-value:1e-172
log p-value:-3.971e+02
Information Content per bp:1.722
Number of Target Sequences with motif4030.0
Percentage of Target Sequences with motif7.36%
Number of Background Sequences with motif2791.8
Percentage of Background Sequences with motif3.79%
Average Position of motif in Targets172.4 +/- 86.4bp
Average Position of motif in Background224.9 +/- 212.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACTGSAGTTMCA
ACTACAATTCCC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACTGSAGTTMCA
AATCGCACTGCATTCCG-

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTGSAGTTMCA
TTGAATGAAATTCGA

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTGSAGTTMCA
--TKCTGTTCCA

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTGSAGTTMCA----------
--TGCAGTTCCNNNNNTGGCCA

TEIL(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ACTGSAGTTMCA-
-----AGGTACAT

HSF1/MA0319.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ACTGSAGTTMCA-
-----TGTTCCAT

SOK2/MA0385.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTGSAGTTMCA
NNCCTGCAGGT---

ovo/MA0126.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACTGSAGTTMCA
---ACNGTTACT

prd/MA0239.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACTGSAGTTMCA
---ACNGTTACT