Homer de novo Motif Results (/oak/stanford/groups/akundaje/projects/alzheimers_parkinsons/pseudobulk/homer/background_genome_overlap/Cluster12/)

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-3911	-9.006e+03	7.65%	1.03%	47.7bp (60.8bp)	CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.916) More Information | Similar Motifs Found	motif file (matrix)
2		1e-1449	-3.338e+03	45.83%	33.38%	54.2bp (68.2bp)	Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer(0.966) More Information | Similar Motifs Found	motif file (matrix)
3		1e-1290	-2.972e+03	49.75%	37.78%	55.0bp (65.3bp)	NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.941) More Information | Similar Motifs Found	motif file (matrix)
4		1e-1012	-2.332e+03	55.25%	44.50%	55.6bp (63.6bp)	POL010.1_DCE_S_III/Jaspar(0.696) More Information | Similar Motifs Found	motif file (matrix)
5		1e-931	-2.145e+03	31.58%	22.59%	55.3bp (62.4bp)	Lhx8/MA0705.1/Jaspar(0.968) More Information | Similar Motifs Found	motif file (matrix)
6		1e-835	-1.924e+03	63.83%	54.17%	56.2bp (61.3bp)	NFATC1/MA0624.1/Jaspar(0.828) More Information | Similar Motifs Found	motif file (matrix)
7		1e-825	-1.901e+03	46.82%	37.30%	55.6bp (65.1bp)	Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.692) More Information | Similar Motifs Found	motif file (matrix)
8		1e-572	-1.319e+03	55.51%	47.42%	56.5bp (67.0bp)	PB0145.1_Mafb_2/Jaspar(0.775) More Information | Similar Motifs Found	motif file (matrix)
9		1e-559	-1.288e+03	43.79%	36.01%	57.1bp (62.7bp)	Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.968) More Information | Similar Motifs Found	motif file (matrix)
10		1e-511	-1.177e+03	25.84%	19.56%	56.1bp (62.9bp)	NFIC/MA0161.1/Jaspar(0.668) More Information | Similar Motifs Found	motif file (matrix)
11		1e-489	-1.127e+03	51.84%	44.38%	55.9bp (62.4bp)	PB0140.1_Irf6_2/Jaspar(0.665) More Information | Similar Motifs Found	motif file (matrix)
12		1e-470	-1.084e+03	1.58%	0.38%	51.9bp (56.7bp)	X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.939) More Information | Similar Motifs Found	motif file (matrix)
13		1e-401	-9.241e+02	9.87%	6.32%	54.0bp (62.9bp)	Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.939) More Information | Similar Motifs Found	motif file (matrix)
14		1e-379	-8.738e+02	37.74%	31.53%	56.9bp (64.4bp)	PB0170.1_Sox17_2/Jaspar(0.767) More Information | Similar Motifs Found	motif file (matrix)
15		1e-265	-6.123e+02	14.53%	10.94%	55.7bp (65.8bp)	Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.664) More Information | Similar Motifs Found	motif file (matrix)
16		1e-243	-5.604e+02	15.59%	12.03%	56.8bp (64.5bp)	Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer(0.749) More Information | Similar Motifs Found	motif file (matrix)
17		1e-208	-4.793e+02	23.49%	19.54%	56.1bp (63.0bp)	E2F6/MA0471.1/Jaspar(0.797) More Information | Similar Motifs Found	motif file (matrix)
18		1e-124	-2.859e+02	0.10%	0.00%	55.3bp (12.7bp)	PB0203.1_Zfp691_2/Jaspar(0.653) More Information | Similar Motifs Found	motif file (matrix)
19		1e-115	-2.663e+02	7.36%	5.62%	56.8bp (60.5bp)	Gfi1/MA0038.1/Jaspar(0.690) More Information | Similar Motifs Found	motif file (matrix)
20		1e-100	-2.312e+02	7.04%	5.45%	54.6bp (55.2bp)	Sp1(Zf)/Promoter/Homer(0.970) More Information | Similar Motifs Found	motif file (matrix)
21		1e-100	-2.308e+02	0.11%	0.01%	50.2bp (38.1bp)	ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer(0.586) More Information | Similar Motifs Found	motif file (matrix)
22		1e-51	-1.194e+02	0.09%	0.01%	46.0bp (39.7bp)	ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer(0.706) More Information | Similar Motifs Found	motif file (matrix)
23		1e-42	-9.736e+01	0.08%	0.01%	56.5bp (57.1bp)	PB0169.1_Sox15_2/Jaspar(0.618) More Information | Similar Motifs Found	motif file (matrix)
24		1e-34	-7.960e+01	0.12%	0.03%	57.6bp (33.1bp)	STAT3/MA0144.2/Jaspar(0.655) More Information | Similar Motifs Found	motif file (matrix)