Information for 1-CCACTAGATGGC (Motif 1)


Reverse Opposite:

p-value:1e-3911
log p-value:-9.006e+03
Information Content per bp:1.774
Number of Target Sequences with motif7677.0
Percentage of Target Sequences with motif7.65%
Number of Background Sequences with motif1002.0
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets99.3 +/- 47.7bp
Average Position of motif in Background98.0 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGATGGC-----
TGGCCACCAGGTGGCACTNT

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGATGGC----
TGGCCACCAGGGGGCGCTA

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGATGGC-------
GCCASCAGGGGGCGCYVNNG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCACTAGATGGC
--AACAGATGGC

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCACTAGATGGC---
---CAAGATGGCGGC

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCACTAGATGGC---
---CAAGATGGCGGC

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCACTAGATGGC
VNAVCAGCTGGC

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCACTAGATGGC--
--AACAGATGGTCN

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGATGGC
ATCCAC--------

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCACTAGATGGC
--AACAKATGGY