Information for 19-GGGGCGGGGCSD (Motif 20)


Reverse Opposite:

p-value:1e-100
log p-value:-2.312e+02
Information Content per bp:1.685
Number of Target Sequences with motif7062.0
Percentage of Target Sequences with motif7.04%
Number of Background Sequences with motif5310.3
Percentage of Background Sequences with motif5.45%
Average Position of motif in Targets100.4 +/- 54.6bp
Average Position of motif in Background91.5 +/- 55.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGGGCSD
GGGGGCGGGGCC-

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGCSD
AGGGGGCGGGGCTG

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGGGCSD
GGGGGCGGGGC--

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGGGCGGGGCSD
GGGGNGGGGC--

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.92
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGGGCSD
GGGNGGGGGCGGGGC--

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGGGCSD-
NNAGGGGCGGGGTNNA

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GGGGCGGGGCSD
TGGGTGGGGC--

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGCSD
RGKGGGCGKGGC--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GGGGCGGGGCSD
DGGGYGKGGC--

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.85
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGGGCSD
NNTNAGGGGCGGNNNN-