Information for 22-GAAAGGGAGACT (Motif 22)


Reverse Opposite:

p-value:1e-51
log p-value:-1.194e+02
Information Content per bp:1.951
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.8 +/- 46.0bp
Average Position of motif in Background110.7 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAAAGGGAGACT
GAAACTGAAACT

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAAAGGGAGACT
GAAAGTGAAAGT

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGGAGACT--
GGAAANTGAAACTNA

IRF7/MA0772.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGGAGACT
ACGAAAGCGAAAGT

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGGAGACT
TCGAAACCGAAACT

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGAGACT-----
GGAAAGCGAAACCAAAAC

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGGAGACT--
AGAAAGTGAAAGTGA

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAGGGAGACT----
AAANNGAAAGTGAAAGTAAAN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAAGGGAGACT
GAAASYGAAASY

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGGGAGACT----
NTNNNAGGAGTCTCNTN