Information for 5-CTAATTAGMN (Motif 5)


Reverse Opposite:

p-value:1e-931
log p-value:-2.145e+03
Information Content per bp:1.523
Number of Target Sequences with motif31691.0
Percentage of Target Sequences with motif31.58%
Number of Background Sequences with motif22033.1
Percentage of Background Sequences with motif22.59%
Average Position of motif in Targets100.0 +/- 55.3bp
Average Position of motif in Background99.7 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx8/MA0705.1/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:CTAATTAGMN
CTAATTAG--

Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:CTAATTAGMN
YTAATTARNN

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:3
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CTAATTAGMN
-TAATTAGN-

EN1/MA0027.2/Jaspar

Match Rank:4
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:CTAATTAGMN
CTAATTAG--

VSX2/MA0726.1/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:CTAATTAGMN
NTAATTAG--

VSX1/MA0725.1/Jaspar

Match Rank:6
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:CTAATTAGMN
NTAATTAG--

LHX2/MA0700.1/Jaspar

Match Rank:7
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CTAATTAGMN
NNTAATTAGN-

EMX2/MA0886.1/Jaspar

Match Rank:8
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CTAATTAGMN
GCTAATTAGC-

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CTAATTAGMN
GGTAATTAGC-

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CTAATTAGMN
GGTAATTAGC-