| p-value: | 1e-1290 |
| log p-value: | -2.972e+03 |
| Information Content per bp: | 1.545 |
| Number of Target Sequences with motif | 49917.0 |
| Percentage of Target Sequences with motif | 49.75% |
| Number of Background Sequences with motif | 36838.0 |
| Percentage of Background Sequences with motif | 37.78% |
| Average Position of motif in Targets | 100.2 +/- 55.0bp |
| Average Position of motif in Background | 99.9 +/- 65.3bp |
| Strand Bias (log2 ratio + to - strand density) | -0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.35 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 1 |
| Score: | 0.94
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | VYTGSCAR-
-TTGCCAAG |
|
|
|
NFIX/MA0671.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.85
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | VYTGSCAR-
CGTGCCAAG |
|
|
|
NFIA/MA0670.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.84
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | VYTGSCAR--
GGTGCCAAGT |
|
|
|
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
| Match Rank: | 4 |
| Score: | 0.83
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | VYTGSCAR
RHTGWCAR |
|
|
|
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
| Match Rank: | 5 |
| Score: | 0.83
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -VYTGSCAR
ARNTGACA- |
|
|
|
NFIC/MA0161.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.81
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | VYTGSCAR
--TGCCAA |
|
|
|
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
| Match Rank: | 7 |
| Score: | 0.81
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | VYTGSCAR--
VBTGWCAGCB |
|
|
|
Hic1/MA0739.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.78
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -VYTGSCAR
GGTTGGCAT |
|
|
|
MEIS2/MA0774.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.76
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | VYTGSCAR
GCTGTCAA |
|
|
|
MEIS1/MA0498.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.75
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | VYTGSCAR
-NTGTCAN |
|
|
|
