Information for 14-CCGGAGAGAA (Motif 11)


Reverse Opposite:

p-value:1e-489
log p-value:-1.127e+03
Information Content per bp:1.562
Number of Target Sequences with motif52022.0
Percentage of Target Sequences with motif51.84%
Number of Background Sequences with motif43282.5
Percentage of Background Sequences with motif44.38%
Average Position of motif in Targets100.0 +/- 55.9bp
Average Position of motif in Background100.1 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCGGAGAGAA--
NNNACCGAGAGTNNN

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCGGAGAGAA
-CGGAGC---

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGGAGAGAA--
GNNACCGAGAATNNN

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGGAGAGAA--
-NNGAGATAAGA

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGGAGAGAA
CWGGCGGGAA

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCGGAGAGAA--
--GGCGGGAARN

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCGGAGAGAA--
-GGGCGGGAAGG

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCGGAGAGAA---
ANTNCCGGGGGGAANTT

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCGGAGAGAA---
--ANAGATAAGAA

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCGGAGAGAA---
---NAGATAAGNN