Information for 18-CATTCAGA (Motif 14)


Reverse Opposite:

p-value:1e-379
log p-value:-8.738e+02
Information Content per bp:1.595
Number of Target Sequences with motif37874.0
Percentage of Target Sequences with motif37.74%
Number of Background Sequences with motif30749.8
Percentage of Background Sequences with motif31.53%
Average Position of motif in Targets99.4 +/- 56.9bp
Average Position of motif in Background100.2 +/- 64.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CATTCAGA----
GACCACATTCATACAAT

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CATTCAGA-----
ACATTCATGACACG

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------CATTCAGA--
NNCATTCATTCATNNN

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CATTCAGA-
NATTCAAAT

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATTCAGA
CCAATCAA-

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATTCAGA
CACATTCCAT

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATTCAGA
ACATTCCA-

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATTCAGA
CACATTCCAT

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CATTCAGA-----
TGGACCAATCAGCACTCT

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CATTCAGA
SCTGTCAVTCAV-